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  published by KARGER , Basel 2002,     supported bySERONO SYMPOSIA       read  Reviews of this book

  MOLECULES OF LIFE & MUTATIONS
  by Professor Siegfried Schwarz, M.D., Laboratory of Molecular Endocrinology
1. LIGANDS Small Molecules PDB# PDBsum Genecards Locus OMIM#
1.1 Calcium and Non-Peptidic Small Molecules
Ca + Calmodulin 1CLM *** CALM1 14q24 114180
Ca + E-Selectin 1ESL *** SELE 1q23 131210
Mellitin 2MLT
Daunomycin + ssDNA 110D
Mitomycin  + dsDNA 199D
Transthyretin + T3 1THA *** TTR 18q11.2 176300
1.2 Peptide Hormones
Acidic Fibroblast Growth Factor 1AFG *** FGF1 5q31 131220
Basic Fibroblast Growth Factor 1BFG *** FGF2 4q25-27 134920
Epidermal Growth Factor 1EPI *** EGF 4q25 131530
Granulocyte Colony Stimulating Factor 1BFD *** CSF3 17q11.2 138970
Glucagon 1-29 1GCN *** GCG 2q36 139030
Human Chorionic Gonadotropin-ß (hCG) 1HRP *** CGB 19q13 118860
Luteinizing Hormone-ß LHB 19q13.32 152780
alpha-Subunit CGA 6q21.1 118850
Growth Hormone (HGH) 3HHR *** GH1 17q22-24 139250
Insulin 1APH *** INS 11p15.5 176730
mutated Insulin "Chicago" 1HIQ *** - - -
Insulin-like Growth Factor (IGF-1) 1GF1 *** IGF1 12q22 147440
Interferon-gamma (IFNg) 1RFB *** IFNG 12q14 147570
Interleukin 1ß (IL-1ß) 2MIB *** IL1B 2q14 147720
Nerve Growth Factor (NGß) 1BET *** NGFB 1p13.1 162030
Oxytocin 1XY1 *** OXT 20p13 167050
Arginin-Vasopressing (AVP) (= Oxytocin) + Neurophysin 2 1NPO   AVP 20p13 192340
Parathyroid hormone 1-37 (PTH) 1HPH *** PTH 11p15.3 168450
Platelet-Derived Growth Factor (PDGF) 1PDG *** PDGFA 7p22 173430
PDGFB 22q12.3 190040
Transforming Growth Factor-alpha (TGFa) 2TGF *** TGFA 2p13 190170
Transforming Growth Factor-beta  (TGFß) 1TFG *** TGFB1 19q13.1 190180
Tumor Necrosis Factor-alpha (TNFa) 1TNF *** TNF 6p21.3 191160
TNFa + Receptor 1TNR *** TNFRSF1A 12p13.2 191190
1.3 Peptide Toxins
Bungarotoxin + nicotinic AcCh-Receptor 1ABT *** CHRNA1 2q24 100690
Charybdotoxin (Scorpion) 1PTX *** KCNQ1 11p15.5 607542
Choleratoxin (B-subunit) 2CHB *** GNAS 20q13.2 139320
Sarafotoxin 1SRB *** EDNRB 13q22 131244
W-Conotoxin GVIa 1OMC *** GRIN1 9q34 138249
LIGAND-BINDING PROTEINS Large Molecules
2. Enzymes
Carbonic anhydrase + bicarb. 1CAM *** CA1 8q22 114800
Citrate synthase 5CSC *** CS 12p11 118950
Cyclin-dependent Kinase 2 (CdK2) 1B38 *** CDK2 12q13 116953
CdK2 + Cyclin A 1QMZ *** CCNA1 ? 604036
DNA polymerase  (KLENOW fragt.) + dCTP 1KFD *** POLD1 19q13.3 174761
DNA sliding clamp 1B77 *** HNPCC 2p22-p21 120435
HIV1-protease+ non-pept.INH 4PHV *** - - -
HIV2-protease+ renin-INH-peptide 2PHV *** - - -
HIV1-reverse transcriptase + nevirapin 3HVT *** - - -
P450 SCC Enzyme + Hem + CAM 1SCC *** CYP11A 15q23 118485
Phospholipase A2 (secretory) 1KVO *** PLA2G2A 1p35 172411
1BP2 ***
Renin + peptidic INH 1SMR *** REN 1q32 179820
RNase/Angiogenin-Inhibitor (RAI) 1A4Y *** RNH 11p15.5 173320
RNase 2BNH *** ANG=RNASE5 14q11 105850
3,20-Steroid dehydrogenase + Carbenoxn. 1HDC *** HSD3B2 1p13.1 201810
3. Membrane Receptors, Channels
ATP Synthase F1 unit 1BMF *** ATP5A1 18q12-q21 164360
hCG Receptor + hCG 1HRP *** LHCGR 2p21 152790
HGH Receptor + HGH 3HHR *** GHR 5p13 600946
GH1 17q22 139250
IL-4 Receptor + IL-2 1ILM *** IL2R 10p15 147730
IL2 4q26 147680
Porin 3POR *** VDAC1 5q31 604492
[Aquaporin 1-Tetramer] 1J4N *** AQP2 12q13 107777
Rhodopsin + Retinal 1BRD *** RHO 3q21 180380
TNFa Receptor   + TNFa 1TNR *** TNFRSF1A 12p13.2 191190
4. Signal Transduction Proteins
Calmodulin + myosin light chain kinase 1CDL *** MYLK 3cen-q21 600922
G-Protein inhibitory Gia + GTPgS 1GIA *** GNAI1 7q21 139310
G-Protein inhibitory Gia + GDP + Mg 1GFI *** GNAI1 7q21 139310
     [G-Protein stimulatory Gsa GNAS1 20q13.2 139320]
Insulin receptor tyrosin kinase 1IRK *** INSR 19q13.2 147670
Protein kinase A + ATP + peptid.INH 1ATP *** PRKAR2A 3p21.3-p21.2 176910
Ras p21 + GDP + Mg 1CRQ *** HRAS 11p15.5 190020
SH2 Domain + Peptide 1SPS *** - - -
Transducin + GDP 1TAD *** GNAT1 3p21 139330
5. Multimodular Adhesion Proteins
Cadherin Module 1NCG *** CDH1 16q22.1 192090
CD2, Immunoglobuline-like Module 1CDB *** CD2 1p13.1 186990
Fibronectin Type I-Module + RGD-Motif 1FBR *** FN1 2q34 135600
EGF-Module 1APO *** - - -
6. DNA-Binding Proteins
DNA Polymerase (human) + dsDNA 1BPX *** POLB 8p11.2 174760
DNA Polymerase (T4 Phage) + dsDNA 1T7P *** - - -
DNA polymerase  (KLENOW fragt.) + dCTP 1KFD *** POLD1 19q13.3 174761
DNA sliding clamp 1B77 *** HNPCC 2p22-p21 120435
Endonuclease EcoRv (bacterial) 2RVE *** DNASE1 16p13.3 125505
Fab of antibody + TTT trinucleotide 1CBV *** SLEB1 1q41-q42 152700
Fos:Jun Protooncogen + dsDNA 1FOS *** FOS 14q24.3 164810
JUN 1p32 165160
GATA-Binding Protein + GATA-Box 1GAT *** GATA1 Xp11.23 305371
Glucocorticoid Receptor + dsDNA 1GLU *** GRL 5q31 138040
Histone Complex 1AOI *** H4F2 1q21 142750
Max  + dsDNA 1HLO *** MAX 14q23 154950
MyoD + dsDNA 1MDY *** MYOD1 11q15.4 159970
NFkB + dsDNA 1SVC *** NFKB1 4q23 164011
Telomer-Binding Protein + RNA 1OTC *** TERF1 8q13 600951
Nucleosmal Complex + dsDNA 1AOI *** HIST1H1A 142709
Pit-1 + dsDNA 1AU7 *** POU1F1 3p11 173110
Progesterone Receptor + Progesterone 1A28 *** PGR 11q22 607311
RXR + T3R + dsDNA 2NLL *** RARA 17q12 180240
T3R 1BSX *** THRA 3p24.3 190160
SRY Protein + ssDNA 1HRY *** SRY Yp11.3 480000
Telomere-Binding Protein + RNA 1OTC *** TERF1 8q13 600951
TITF1 or Vnd or NKX2-1 1NK3 *** NKX2A 14q13 600635
p53 1TSR *** TP53 17p13.1 191170
7. Immunological Proteins
Antibody, complete immunoglobulin G 1IGT *** 14q32.33 147100
Complement Component C5a 1C5A *** C5 9q34.1 120900
Cyclophilin + Cyclosporin 2RMA *** PPID 4q31.3 601753
Fab of antibody + TTT trinucleotide 1CBV *** SLEB1 1q41-q42 152700
Fab of antibody + Lysozyme 1BQL *** BTK Xq21.3-q22 300300
Fab of antibody + Progesterone 1DBB *** - - -
Fab of antibody + Peptide 2IGF *** - - -
Fab of antibody + Trisaccharide 1MFD *** - - -
HIV gp120 core protein + CD4 + Fab 1GC1 *** CD4 12pter 186940
HLA-DR + Influenza Virus Hemagglutinin 1DLH *** HLA-DRA 6p21.3 142860
T Cell Receptor + HTLV1-Tax + HLA-A +ß2M 1AO7 *** TCRA 14q11.2 186880
8. Miscellaneous Macromolecules
Apolipoprotein A1 1AV1 *** APOA1 11q23 107680
ß2-Crystallin 1BLB *** CRYBA1 17q11.1 123610
Collagen (Gly-Pro-Pro) 1BBE *** COL1A1 17q21.31 120150
Foot & Mouth Virus Disease Coat Protein 1BBT *** - - -
GroEl Chaperone 1OEL *** HSPD1 ? 118190
Hemoglobin A 2HBC *** HBA1 16pter 141800
Proteasome 1PML *** PSMA5 1p13 176844
Spectrin Modules 2SPC *** SPTA1 1q21 182860
Ubiquitin 1AAR *** UBB 17p12-p11.1 191339
  A FEW RELATED LINKS
  Major 3D Molecular Structure Websites (University of Massachusetts, Amherst)   ExPASy - SWISS-PROT   SCOP (Structural Classification of Proteins)   RasMol and Chime (University of Massachusetts, Amherst)   Animated Tutorials on Biomolecular Structures   Where to get "Molecules" for RasMol to display?   RasMol Gallery   Rotating RasMol Images   3D Molecular Tutorials   History of Visualization of Biological Macromolecules
   
    Webpage created by Siegfried Schwarz, former webmaster of this division, last update: May 31, 2017